PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010926543.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bHLH
Protein Properties Length: 241aa    MW: 26736 Da    PI: 6.6953
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010926543.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.21.9e-052977254
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    +  ++erE+  Rd++N+ f eL  +l +a     + + Ka+iL  A + +++L
  XP_010926543.1 29 KIHKSEREKLKRDQLNELFLELGHVLEPA----RQNNGKATILGDASRILRDL 77
                    66789*********************998....67888999999998877766 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.103.3E-72595IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.05E-102591IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.32E-42582No hitNo description
PROSITE profilePS5088811.2042777IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    Send to blast
MANEANVAAE KPVDRSLSNK KNQRRVPKKI HKSEREKLKR DQLNELFLEL GHVLEPARQN  60
NGKATILGDA SRILRDLLAH VESLRKQNAA LLTESSYVTA ERDEIRDENT ALQAEITDLQ  120
NELQARIQSG SMWANSMDMG PPTLPQPLST MPPMLQQPPV IRPVYSAPIQ ELQLFPESRT  180
APAPPTPNSN VSRPHARYPT PSDSWPGQLL SSLPRTVQEG HLSSTSSINT TSSREEGSDE  240
A
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010926543.11e-175PREDICTED: transcription factor bHLH47-like
TrEMBLM0U8N66e-83M0U8N6_MUSAM; Uncharacterized protein
STRINGGSMUA_AchrUn_randomP12770_0012e-82(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP24813884
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.36e-41bHLH family protein